SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    24, 1439, 568, 31, 201, 257, 258, 1435, 
    1441, 1449, 1456, 1458, 160, 337, 814
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00123

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "18.16"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 32,
        "rows_produced_per_join": 6,
        "filtered": "19.99",
        "index_condition": "(`testdobroded`.`cscart_product_prices`.`product_id` in (24,1439,568,31,201,257,258,1435,1441,1449,1456,1458,160,337,814))",
        "cost_info": {
          "read_cost": "17.52",
          "eval_cost": "0.64",
          "prefix_cost": "18.16",
          "data_read_per_join": "153"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`testdobroded`.`cscart_product_prices`.`lower_limit` = 1) and (`testdobroded`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
24 429.00000000
31 4095.00000000
160 329.00000000
201 279.00000000
257 529.00000000
258 989.00000000
337 1459.00000000
568 489.00000000
814 349.00000000
1435 359.00000000
1439 679.00000000
1441 439.00000000
1449 329.00000000
1456 339.00000000
1458 369.00000000